The detailed information of tRNA gene sequence


Sequence ID>WENV180096902
Genome IDMTBK01154329
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 357
End posion on genome 286
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttcgttgaa
tRNA gene sequence 
GGCGAGGTAGCTCAACGGTGGAGCAGTGGACTCATAAGCCATTGGTTCTGGGTTCAAATC
CCAGCCTCGCCAttt
Downstream region at tRNA end position 
ttcttttaaa
Secondary structure (Cloverleaf model)
>WENV180096902	Met	CAT
                   a      Attt ttcttttaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
        A A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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