The detailed information of tRNA gene sequence


Sequence ID>WENV180096904
Genome IDMTBK01154706
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 360
End posion on genome 275
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcccgcttc
tRNA gene sequence 
GGAGGGATGCCGGAGCGGACGAACGGGACGGTCTTGAAAACCGTTGAGGCGCGAGCCTCC
GTGGGTTCGAATCCCACTCCCTCCGCaa
Downstream region at tRNA end position 
tgcggcgagg
Secondary structure (Cloverleaf model)
>WENV180096904	Ser	TGA
                   c      GCaa tgcggcgagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        G     TGAGGCGCGAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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