The detailed information of tRNA gene sequence


Sequence ID>WENV180096920
Genome IDMTBK01155959
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 674
End posion on genome 749
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgtttcacag
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAAGTCGGAAGTTCAA
ATCTTCTCGCCCCGACac
Downstream region at tRNA end position 
atgatatcag
Secondary structure (Cloverleaf model)
>WENV180096920	Pro	TGG
                   g      ACac atgatatcag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T T C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A A G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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