The detailed information of tRNA gene sequence


Sequence ID>WENV180096924
Genome IDMTBK01155997
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 264
End posion on genome 352
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtgctatat
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTTATGGAGCTGGTCTTGAAAACCAGTGACACCGCAAGGTGC
CGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaatatt
Secondary structure (Cloverleaf model)
>WENV180096924	Ser	TGA
                   t      GCCA ttttaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGACACCGCAAGGTGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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