The detailed information of tRNA gene sequence


Sequence ID>WENV180096932
Genome IDMTBK01156250
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 376
End posion on genome 285
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaatattat
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAGGCGCACGACTGGAAATCGTGTATACCCTTTAAAGG
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttaagca
Secondary structure (Cloverleaf model)
>WENV180096932	Ser	GGA
                   t      GCCA gttttaagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TATACCCTTTAAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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