The detailed information of tRNA gene sequence


Sequence ID>WENV180096934
Genome IDMTBK01156408
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6926
End posion on genome 6999
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcagatgcat
tRNA gene sequence 
GGGCCTGTAGCTTAGTCGGCAGAGCGACGGACTCTTAATCCGTAGGCCAAGGGTTCGAAC
CCCTTCAGGCCCGCtg
Downstream region at tRNA end position 
tagattcaat
Secondary structure (Cloverleaf model)
>WENV180096934	Lys	CTT
                   t      GCtg tagattcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    C       T T C G       A A G G G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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