The detailed information of tRNA gene sequence


Sequence ID>WENV180096937
Genome IDMTBK01156422
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 79
End posion on genome 156
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcacaatgc
tRNA gene sequence 
GGGGTCGTAGTTAAGCTTGGTTATAACGCCGGCCTGTCACGTCGGAGGGCGTGGGTTCAA
ATCCCATCGGCCCCGCCA
Downstream region at tRNA end position 
gtaaacgaag
Secondary structure (Cloverleaf model)
>WENV180096937	Asp	GTC
                   c      GCCA gtaaacgaag
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    T C G A        A      + | | | |     A
  T         A T T G       G T G G G     C
  G         | | | |                 T T
  G         T A A C
    T T A          G     AGGGC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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