The detailed information of tRNA gene sequence


Sequence ID>WENV180096940
Genome IDMTBK01156581
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 505
End posion on genome 429
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgtaccactt
tRNA gene sequence 
CGAGAAGTAGCACAACTTGGTAGTGCACTTGGTTTGGGACCAAGGGGTTGCAGGTTCAAA
TCCTGTCTTCTCGACCA
Downstream region at tRNA end position 
ttgactatta
Secondary structure (Cloverleaf model)
>WENV180096940	Pro	TGG
                   t      ACCA ttgactatta
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C A C G       G C A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        A     GGGTT
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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