The detailed information of tRNA gene sequence


Sequence ID>WENV180096948
Genome IDMTBK01157150
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 701
End posion on genome 625
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgcattttgt
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTTAGAGCGCTACGTTCACATCGTAGAAGTCACTGGTTCGAA
TCCGGTATCACCCACCA
Downstream region at tRNA end position 
ccatgatttt
Secondary structure (Cloverleaf model)
>WENV180096948	Val	CAC
                   t      ACCA ccatgatttt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T G G C C     A
      C G A        A      | | + | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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