The detailed information of tRNA gene sequence


Sequence ID>WENV180096951
Genome IDMTBK01157215
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2271
End posion on genome 2345
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtctcttgc
tRNA gene sequence 
GGGCTATTAGCTCAGCTGGTTAGAGCGCGCCTCTGATAAGGGCGAGGTCTCTGGTTCGAA
TCCAGAATGGCCCACtg
Downstream region at tRNA end position 
tgcccggtag
Secondary structure (Cloverleaf model)
>WENV180096951	Ile	GAT
                   c      ACtg tgcccggtag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     A G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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