The detailed information of tRNA gene sequence


Sequence ID>WENV180096955
Genome IDMTBK01157366
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 794
End posion on genome 703
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acagccctgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGGCGGCCTCGAAAGCCGTTGTGCTCCTTTTGGGG
TACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ccctttttcc
Secondary structure (Cloverleaf model)
>WENV180096955	Ser	CGA
                   c      GCCA ccctttttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCTCCTTTTGGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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