The detailed information of tRNA gene sequence


Sequence ID>WENV180096956
Genome IDMTBK01157523
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 771
End posion on genome 845
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacggcatcc
tRNA gene sequence 
GGATGTGTAGCTCAGTTGGTTAGAGCGTTCGCTTCACACGCGAGAGGCCGGGGGTTCGAG
TCCCTCCACATCCACgt
Downstream region at tRNA end position 
aaaagccccg
Secondary structure (Cloverleaf model)
>WENV180096956	Val	CAC
                   c      ACgt aaaagccccg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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