The detailed information of tRNA gene sequence


Sequence ID>WENV180096957
Genome IDMTBK01157572
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 617
End posion on genome 542
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaattatttt
tRNA gene sequence 
GGCCCATTCGTCTAGACGGCCTAGGACGCCAGGTTTTCATCCTGGAAATCGGGGGTTCGA
ATCCCCCATGGGTCACta
Downstream region at tRNA end position 
atttaaaaaa
Secondary structure (Cloverleaf model)
>WENV180096957	Glu	TTC
                   t      ACta atttaaaaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     C C C C C     A
    C A G A        C      | | | | |     G
  G         T C T G       G G G G G     C
  G         + | | |                 T T
  C         G G A C
    C T A          G     AAATC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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