The detailed information of tRNA gene sequence


Sequence ID>WENV180096961
Genome IDMTBK01157689
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2652
End posion on genome 2727
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaatgcacac
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGCGGGTTCAAG
TCCTGCCTGGCCTGCCt
Downstream region at tRNA end position 
ggttttttca
Secondary structure (Cloverleaf model)
>WENV180096961	Trp	CCA
                   c      GCCt ggttttttca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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