The detailed information of tRNA gene sequence


Sequence ID>WENV180096966
Genome IDMTBK01158138
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 104
End posion on genome 180
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acagcgaaat
tRNA gene sequence 
GGCGCAGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCTGCGTCGCCA
Downstream region at tRNA end position 
taattgccgg
Secondary structure (Cloverleaf model)
>WENV180096966	Asp	GTC
                   t      GCCA taattgccgg
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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