The detailed information of tRNA gene sequence


Sequence ID>WENV180096968
Genome IDMTBK01158200
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1033
End posion on genome 1109
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acctcaacgc
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCCACCA
Downstream region at tRNA end position 
agtaaagaac
Secondary structure (Cloverleaf model)
>WENV180096968	fMet	CAT
                   c      ACCA agtaaagaac
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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