The detailed information of tRNA gene sequence


Sequence ID>WENV180096971
Genome IDMTBK01158652
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17111
End posion on genome 17186
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcagatacaT
tRNA gene sequence 
GGGCCTGTAGCTTAGTCGGCAGAGCGACGGACTCTTAATCCGTAGGCCAAGGGTTCAAAT
CCCTTCAGGCCCGTCg
Downstream region at tRNA end position 
aacttctttt
Secondary structure (Cloverleaf model)
>WENV180096971	Lys	CTT
                   T      GTCg aacttctttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    C       T T C G       A A G G G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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