The detailed information of tRNA gene sequence


Sequence ID>WENV180096978
Genome IDMTBK01159519
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 385
End posion on genome 462
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgaaaagt
tRNA gene sequence 
GGAGCTGTAGCTCAATTCGGTTAGAGCGCTGGCCTGTCACGCCAGAGGTCGCGGGTTCAA
GTCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
cttttttcaa
Secondary structure (Cloverleaf model)
>WENV180096978	Asp	GTC
                   t      GCCA cttttttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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