The detailed information of tRNA gene sequence


Sequence ID>WENV180096993
Genome IDMTBK01160841
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2215
End posion on genome 2302
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcatgctgtt
tRNA gene sequence 
GCCGGGGTGATGGAATTGGCAGTCATGCGCGACTCAAAATCGCGTGGGGTAGCCCCCCGT
GCGGGTTCGACTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
ttttttgcct
Secondary structure (Cloverleaf model)
>WENV180096993	Leu	CAA
                   t      ACCA ttttttgcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G T A       G C G G G     C
    G       + | | |                 T T
    G       T C A T
      C A G        G     TGGGGTAGCCCCCCGT
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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