The detailed information of tRNA gene sequence


Sequence ID>WENV180096994
Genome IDMTBK01160862
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 550
End posion on genome 626
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atcaaattaa
tRNA gene sequence 
GGACGCGTAGCTCAGTTGGCTAGAGCGTTCGCTTGACGTGCGAAAGGTCACAGGTTCGAG
CCCTGTCGCGTCCACCA
Downstream region at tRNA end position 
aaaatttcac
Secondary structure (Cloverleaf model)
>WENV180096994	Val	GAC
                   a      ACCA aaaatttcac
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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