The detailed information of tRNA gene sequence


Sequence ID>WENV180096997
Genome IDMTBK01161144
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 178
End posion on genome 102
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tctccattat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
agccatcata
Secondary structure (Cloverleaf model)
>WENV180096997	fMet	CAT
                   t      ACCA agccatcata
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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