The detailed information of tRNA gene sequence


Sequence ID>WENV180096999
Genome IDMTBK01161197
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 173
End posion on genome 248
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgcaattgg
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCCTCGTTCGCAATGAGGAGGTCAGCGGTTCGATC
CCGCTCGGCTCCACCA
Downstream region at tRNA end position 
acccccttcc
Secondary structure (Cloverleaf model)
>WENV180096999	Ala	CGC
                   g      ACCA acccccttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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