The detailed information of tRNA gene sequence


Sequence ID>WENV180097000
Genome IDMTBK01161216
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 82
End posion on genome 171
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaagcgcac
tRNA gene sequence 
GGAGAGATGCCAGAGCGGTTGAATGGGACGGTCTCGAAAACCGTTGTAGTCCTTGTGGCT
ACCGTGGGTTCGAATCCCACTCTCTCCGCCt
Downstream region at tRNA end position 
aggaaaagat
Secondary structure (Cloverleaf model)
>WENV180097000	Ser	CGA
                   c      GCCt aggaaaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTAGTCCTTGTGGCTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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