The detailed information of tRNA gene sequence


Sequence ID>WENV180097010
Genome IDMTBK01162075
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 773
End posion on genome 697
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctgccattgt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGTCGTGAGTTCGAG
CCTCATCCGGGTCGCCA
Downstream region at tRNA end position 
tttgcctctg
Secondary structure (Cloverleaf model)
>WENV180097010	Asp	GTC
                   t      GCCA tttgcctctg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     T A C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G T G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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