The detailed information of tRNA gene sequence


Sequence ID>WENV180097011
Genome IDMTBK01162075
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 693
End posion on genome 618
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtcgccattt
tRNA gene sequence 
GCCTCTGTAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGTCGATGGTTCGATT
CCGTCCGGAGGCACCA
Downstream region at tRNA end position 
attgcggatt
Secondary structure (Cloverleaf model)
>WENV180097011	Phe	GAA
                   t      ACCA attgcggatt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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