The detailed information of tRNA gene sequence


Sequence ID>WENV180097020
Genome IDMTBK01162271
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 649
End posion on genome 725
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttcaaacaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
aattttaagc
Secondary structure (Cloverleaf model)
>WENV180097020	fMet	CAT
                   a      ACCA aattttaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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