The detailed information of tRNA gene sequence


Sequence ID>WENV180097029
Genome IDMTBK01162663
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 390
End posion on genome 317
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gttcaggcgt
tRNA gene sequence 
TCCCCTGTAGCTCAGTCGGTAGAGCAGGTGGCTGTTAACCACCCTGTCGATGGTTCGAGT
CCGTCCGGGGGAGCtt
Downstream region at tRNA end position 
aagaggtcaa
Secondary structure (Cloverleaf model)
>WENV180097029	Asn	GTT
                   t      GCtt aagaggtcaa
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CTGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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