The detailed information of tRNA gene sequence


Sequence ID>WENV180097034
Genome IDMTBK01163431
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 633
End posion on genome 557
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgaatgagtt
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGGAGCGCGTCTGATTTGGGATCAGAAGGTCGCAGGTTCAAA
TCCTGTCGCCCCGACCA
Downstream region at tRNA end position 
ttaaaaaagc
Secondary structure (Cloverleaf model)
>WENV180097034	Pro	TGG
                   t      ACCA ttaaaaaagc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G G A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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