The detailed information of tRNA gene sequence


Sequence ID>WENV180097039
Genome IDMTBK01163643
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1357
End posion on genome 1283
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctggaggtat
tRNA gene sequence 
GCCGCTATCGTCTAGTGGTTAGGACAACAGGTTTTCATCCTGTAAACCGGGGTTCGATTC
CCCGTAGCGGTACCA
Downstream region at tRNA end position 
taaattaaac
Secondary structure (Cloverleaf model)
>WENV180097039	Glu	TTC
                   t      ACCA taaattaaac
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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