The detailed information of tRNA gene sequence


Sequence ID>WENV180097046
Genome IDMTBK01164278
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 107
End posion on genome 30
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
cataatgatt
tRNA gene sequence
CGGGGCGTAGCGCAGCTTGGTTAGCGCGCTTGGTTCGGGACCAAGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position
tctaacccta
Secondary structure (Cloverleaf model)
>WENV180097046	Pro	CGG
                   t      ACCA tctaacccta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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