The detailed information of tRNA gene sequence


Sequence ID>WENV180097052
Genome IDMTBK01164575
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1418
End posion on genome 1342
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtttcaaaca
tRNA gene sequence 
GGGCGACTAGCTCAGGTGGTTAGAGCGCCGTCTTCACACGGCGGAGGTCACTGGTTCGAG
CCCAGTGTCGCCCACCA
Downstream region at tRNA end position 
tcagcgatcc
Secondary structure (Cloverleaf model)
>WENV180097052	Val	CAC
                   a      ACCA tcagcgatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          C G
                    T     T G A C C     A
      G G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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