The detailed information of tRNA gene sequence


Sequence ID>WENV180097071
Genome IDMTBK01166428
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 314
End posion on genome 389
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccagccacgg
tRNA gene sequence 
GGGCCATTAGCTCAGGTGGCAGAGCACCTGACTTTTAATCAGGGTGTCGGAGGTTCGAAT
CCTCCATGGCTCACCA
Downstream region at tRNA end position 
tttatcgcgg
Secondary structure (Cloverleaf model)
>WENV180097071	Lys	TTT
                   g      ACCA tttatcgcgg
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     C C T C C     A
      G G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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