The detailed information of tRNA gene sequence


Sequence ID>WENV180097073
Genome IDMTBK01166428
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 494
End posion on genome 587
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgcttaggt
tRNA gene sequence 
GGAGAGGTACCCAAGTCGGCTGAAGGGGCGGGTTTGCTAAACCTGTAGTAGGGATATTAC
CCTAGCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacgccccca
Secondary structure (Cloverleaf model)
>WENV180097073	Ser	GCT
                   t      GCCA gacgccccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  G           | | |                 T T
  C         A G G G
    T G A          G     TAGTAGGGATATTACCCTAGC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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