The detailed information of tRNA gene sequence


Sequence ID>WENV180097078
Genome IDMTBK01166428
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 921
End posion on genome 996
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tccaaattgt
tRNA gene sequence 
GGGGATATAGCTCAACTGGGAGAGCGCGTGAATGGCATTCACGAGGTCAGGGGTTCGATT
CCCCTTATCTCCACCA
Downstream region at tRNA end position 
aagaatttta
Secondary structure (Cloverleaf model)
>WENV180097078	Ala	GGC
                   t      ACCA aagaatttta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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