The detailed information of tRNA gene sequence


Sequence ID>WENV180097079
Genome IDMTBK01166478
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 332
End posion on genome 244
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
gacgacactc
tRNA gene sequence 
GTCCGGGTGGCGGAATTGGTAGACGCGCTAGCTTGAGGTGCTAGTGCCCGTTTTAGGGCG
TGGAGGTTCAAGTCCTCTCTCGGACACCA
Downstream region at tRNA end position 
gaccgaacgg
Secondary structure (Cloverleaf model)
>WENV180097079	Leu	GAG
                   c      ACCA gaccgaacgg
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCGTTTTAGGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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