The detailed information of tRNA gene sequence


Sequence ID>WENV180097081
Genome IDMTBK01166563
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 18870
End posion on genome 18954
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctagaagcgg
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCTGGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGtaa
Downstream region at tRNA end position 
ttctgcaccc
Secondary structure (Cloverleaf model)
>WENV180097081	Ser	TGA
                   g      Gtaa ttctgcaccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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