The detailed information of tRNA gene sequence


Sequence ID>WENV180097083
Genome IDMTBK01166652
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1875
End posion on genome 1800
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtcgatgtgg
tRNA gene sequence 
GCCGACGTAGCTCAATTGGCAGAGCAGGGGTTTTGTAAACCTCAGGTTGCGGGTTCGAGT
CCCATCGTCGGCTCCA
Downstream region at tRNA end position 
ggtatttgtg
Secondary structure (Cloverleaf model)
>WENV180097083	Thr	TGT
                   g      TCCA ggtatttgtg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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