The detailed information of tRNA gene sequence


Sequence ID>WENV180097087
Genome IDMTBK01166783
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 465
End posion on genome 390
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gccttttcgg
tRNA gene sequence 
GGGCCCATAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGGGGGTTCAAGT
CCCTCTGGGCCCACCA
Downstream region at tRNA end position 
tttcttcatt
Secondary structure (Cloverleaf model)
>WENV180097087	Ile2	CAT
                   g      ACCA tttcttcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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