The detailed information of tRNA gene sequence


Sequence ID>WENV180097088
Genome IDMTBK01166791
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3303
End posion on genome 3376
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgtcggaaT
tRNA gene sequence 
GTCCCCATCGTCTAGAGGTTAGGACAGCGGGTTTTCAACCCGCCAACAGGGGTTCGATTC
CCCTTGGGGATATag
Downstream region at tRNA end position 
atggagccat
Secondary structure (Cloverleaf model)
>WENV180097088	Glu	TTC
                   T      ATag atggagccat
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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