The detailed information of tRNA gene sequence


Sequence ID>WENV180097094
Genome IDMTBK01166902
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1292
End posion on genome 1202
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAAGTACCCAAGAGGTCGAAGGGGACGGTTTGCTAAACCGTTAGTGGGGGCAACTCC
AGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
atccattcgt
Secondary structure (Cloverleaf model)
>WENV180097094	Ser	GCT
                   n      GCCA atccattcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TAGTGGGGGCAACTCCAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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