The detailed information of tRNA gene sequence


Sequence ID>WENV180097106
Genome IDMTBK01168141
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 482
End posion on genome 393
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgttaataaa
tRNA gene sequence 
GGAAGGATGGGTGAGTGGCTGAAACCAACAGTTTGCTAAACTGTCGTACTCGTGAGGGTA
CCGGGGGTTCGAATCCCCCTTCTTCCGCCA
Downstream region at tRNA end position 
agtttgcaaa
Secondary structure (Cloverleaf model)
>WENV180097106	Ser	GCT
                   a      GCCA agtttgcaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGTGAGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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