The detailed information of tRNA gene sequence


Sequence ID>WENV180097117
Genome IDMTBK01169420
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 526
End posion on genome 450
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agagatcttT
tRNA gene sequence 
GGGCTTGTAGATCAGCGGTAGATCGCCGCCTTCGCAAGGCGGAGGCCACGGGTTCGAATC
CCGTCAAGTCCATCC
Downstream region at tRNA end position 
Aggagcaaag
Secondary structure (Cloverleaf model)
>WENV180097117	Ala	CGC
                   T      ATCC Aggagcaaag
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     G
      C     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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