The detailed information of tRNA gene sequence


Sequence ID>WENV180097125
Genome IDMTBK01170034
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2476
End posion on genome 2400
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cagagtcctT
tRNA gene sequence 
GCTCCCGTAGCTCAGCTGGATAGAGCACTTCCCTCCTAAGGAAGGGGTCGTGCGTTCGAA
TCGCGCCGGGGGCAGCa
Downstream region at tRNA end position 
gagaggccgt
Secondary structure (Cloverleaf model)
>WENV180097125	Arg	CCT
                   T      AGCa gagaggccgt
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C G C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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