The detailed information of tRNA gene sequence


Sequence ID>WENV180097133
Genome IDMTBK01170494
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 454
End posion on genome 528
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cgggcggcga
tRNA gene sequence 
GCGCCTCTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGGGTTCCGGGTTCGAGT
CCCGGGGGGCGTACCg
Downstream region at tRNA end position 
ataccacgtc
Secondary structure (Cloverleaf model)
>WENV180097133	Lys	CTT
                   a      ACCg ataccacgtc
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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