The detailed information of tRNA gene sequence


Sequence ID>WENV180097139
Genome IDMTBK01170946
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 591
End posion on genome 684
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaacaaaagc
tRNA gene sequence 
GGAGAGATGTCTGAGTGGCTGAAGGAGCACGACTGGAAATCGTGTGTACGCCCCCAAAGG
TGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaaaaaat
Secondary structure (Cloverleaf model)
>WENV180097139	Ser	GGA
                   c      GCCA tttaaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TGTACGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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