The detailed information of tRNA gene sequence


Sequence ID>WENV180097155
Genome IDMTBK01171649
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2424
End posion on genome 2499
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttgatttt
tRNA gene sequence 
CGGGGCGTAGCGCAGATGGAAGCGCGTTGGTTTCGGGAACCAAAGGTCGCTGGTTCAAAT
CCAGTCGTCCCGACCA
Downstream region at tRNA end position 
tagattaaaa
Secondary structure (Cloverleaf model)
>WENV180097155	Pro	CGG
                   t      ACCA tagattaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      A G A        A      + | | | |     A
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      A A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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