The detailed information of tRNA gene sequence


Sequence ID>WENV180097161
Genome IDMTBK01171862
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 540
End posion on genome 612
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaatgattt
tRNA gene sequence 
GGTCCCTTCGTCTAGGGGTTAGGACGCCAGATTTTCATTCTGGAAACAGGGGTTCGATTC
CCCTAGGGACTGCat
Downstream region at tRNA end position 
aaaaaaagct
Secondary structure (Cloverleaf model)
>WENV180097161	Glu	TTC
                   t      GCat aaaaaaagct
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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