The detailed information of tRNA gene sequence


Sequence ID>WENV180097163
Genome IDMTBK01171960
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 347
End posion on genome 418
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgtgtacac
tRNA gene sequence 
GGTCGGTTGTCCGAGTGGCTAGGAATCGGTCTGCAAAACCGGGAACGGCGGTTCGAATCC
GCCACCGACCTCaa
Downstream region at tRNA end position 
ctaaatcccc
Secondary structure (Cloverleaf model)
>WENV180097163	Cys	GCA
                   c      TCaa ctaaatcccc
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C T       G G C G G     C
      G       | | |                 T T
      G     A G G A
        C T        A     GAAC
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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