The detailed information of tRNA gene sequence


Sequence ID>WENV180097164
Genome IDMTBK01172041
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 526
End posion on genome 454
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctatcatcga
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGTAGCTTGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAAT
CCTGTCCCTGCTAaga
Downstream region at tRNA end position 
tgctaaaagc
Secondary structure (Cloverleaf model)
>WENV180097164	fMet	CAT
                   a      Aaga tgctaaaagc
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | +                 T T
    G       G C T T
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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