The detailed information of tRNA gene sequence


Sequence ID>WENV180097174
Genome IDMTBK01172683
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8908
End posion on genome 8815
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggatttga
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGTCGAAGGCGCTCGACTCGAAATCGAGTAGGCGGCTAATCCC
CGTCTCGTGAGTTCGAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
tagaaaattt
Secondary structure (Cloverleaf model)
>WENV180097174	Ser	CGA
                   a      GCCA tagaaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G A G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAGGCGGCTAATCCCCGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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